Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC132872.1-201ENST00000566986 1195 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 PMM2-216ENST00000569958 698 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 AC022966.2-201ENST00000587434 367 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 AC116036.2-201ENST00000607592 462 ntBASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM88BA6NKF7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 HMGA1P1-201ENST00000415560 1062 ntBASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 ASLP1-201ENST00000428790 637 ntBASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 Z84721.1-201ENST00000438841 372 ntBASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 AC112694.1-202ENST00000540985 943 ntBASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TMEM88BA6NKF7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
TMEM88BA6NKF7 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC16.08■□□□□ 0.17
TMEM88BA6NKF7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.08■□□□□ 0.17
TMEM88BA6NKF7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM88BA6NKF7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TMEM88BA6NKF7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 AL049792.1-201ENST00000424708 1262 ntBASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 TMEM256P1-201ENST00000430550 340 ntBASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 RN7SL487P-201ENST00000468140 344 ntBASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 HAX1-211ENST00000532105 771 ntTSL 3 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 AC006273.1-201ENST00000606966 861 ntBASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 AC011477.7-201ENST00000617163 1440 ntBASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 STK16-202ENST00000409260 1493 ntTSL 5 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMEM88BA6NKF7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 OR7E122P-201ENST00000383606 1017 ntBASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AC138392.1-201ENST00000427577 921 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms