Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC093433.1-201ENST00000458048 571 ntBASIC12.22□□□□□ -0.45
TMEM235A6NFC5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AC011495.1-201ENST00000498085 584 ntBASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AC102953.2-201ENST00000609755 3026 ntBASIC12.22□□□□□ -0.45
TMEM235A6NFC5 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 TMEM261P1-201ENST00000604899 340 ntBASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AC145423.3-201ENST00000615987 467 ntBASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AL691403.2-201ENST00000618460 490 ntBASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM235A6NFC5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TMEM235A6NFC5 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 AL645937.6-201ENST00000641122 3727 ntBASIC12.2□□□□□ -0.46
TMEM235A6NFC5 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.2□□□□□ -0.46
TMEM235A6NFC5 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms