Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RN7SL736P-201ENST00000613111 269 ntBASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 BRD7P5-201ENST00000299197 1822 ntBASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAI2Q9Y5P3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AC103592.1-201ENST00000394513 664 ntBASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 HMGA1P1-201ENST00000415560 1062 ntBASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 DUX4L50-201ENST00000455245 715 ntBASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 BAP1-211ENST00000615113 489 ntBASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AC011491.1-203ENST00000637688 543 ntBASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 GRK6P1-201ENST00000400595 1711 ntBASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
RAI2Q9Y5P3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 AC234782.1-201ENST00000451950 919 ntBASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 POU5F1P2-201ENST00000521750 823 ntBASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 MEG3_2.1-201ENST00000611456 105 ntBASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms