Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC090386.2-201ENST00000623010 1039 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 BEND3P1-201ENST00000421591 1944 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 CYP4F23P-201ENST00000593402 1579 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 AC011498.7-201ENST00000624986 2027 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AL356585.2-201ENST00000625078 2396 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 RN7SKP214-201ENST00000364208 315 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 MIR1247-201ENST00000408206 136 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AKR7A2P1-201ENST00000460134 915 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AC125604.1-201ENST00000496255 707 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AC103810.3-201ENST00000583567 96 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 AL451050.2-201ENST00000606967 682 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 NAP1L6-202ENST00000641404 1222 ntBASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PARPBPQ9NWS1 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
PARPBPQ9NWS1 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
PARPBPQ9NWS1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
PARPBPQ9NWS1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.83□□□□□ -0.35
PARPBPQ9NWS1 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PARPBPQ9NWS1 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 AC022217.1-201ENST00000521069 738 ntBASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms