Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VRK1Q99986 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.72□□□□□ -0.37
VRK1Q99986 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.72□□□□□ -0.37
VRK1Q99986 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
VRK1Q99986 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
VRK1Q99986 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VRK1Q99986 FP325330.2-201ENST00000624219 5630 ntBASIC12.72□□□□□ -0.37
VRK1Q99986 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.72□□□□□ -0.37
VRK1Q99986 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 FNTAP2-201ENST00000430308 634 ntBASIC12.72□□□□□ -0.37
VRK1Q99986 CHMP1AP1-201ENST00000445563 662 ntBASIC12.72□□□□□ -0.37
VRK1Q99986 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.72□□□□□ -0.37
VRK1Q99986 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.72□□□□□ -0.37
VRK1Q99986 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.72□□□□□ -0.37
VRK1Q99986 ZNF767P-206ENST00000513792 565 ntBASIC12.72□□□□□ -0.37
VRK1Q99986 AC126915.1-201ENST00000522847 1038 ntBASIC12.72□□□□□ -0.37
VRK1Q99986 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.72□□□□□ -0.37
VRK1Q99986 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
VRK1Q99986 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.72□□□□□ -0.37
VRK1Q99986 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.72□□□□□ -0.37
VRK1Q99986 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.72□□□□□ -0.37
VRK1Q99986 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 AC004899.2-201ENST00000622993 3860 ntBASIC12.72□□□□□ -0.37
VRK1Q99986 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.72□□□□□ -0.37
VRK1Q99986 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.72□□□□□ -0.37
VRK1Q99986 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VRK1Q99986 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 INE2-201ENST00000630399 1874 ntBASIC12.72□□□□□ -0.37
VRK1Q99986 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VRK1Q99986 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VRK1Q99986 AP000593.2-201ENST00000542775 1433 ntBASIC12.71□□□□□ -0.37
VRK1Q99986 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.71□□□□□ -0.37
VRK1Q99986 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
VRK1Q99986 AC083964.2-201ENST00000623988 2396 ntBASIC12.71□□□□□ -0.37
VRK1Q99986 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.71□□□□□ -0.37
VRK1Q99986 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.71□□□□□ -0.37
VRK1Q99986 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VRK1Q99986 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.71□□□□□ -0.37
VRK1Q99986 EIF4HP1-201ENST00000453115 687 ntBASIC12.71□□□□□ -0.37
VRK1Q99986 AKR7A2P1-201ENST00000460134 915 ntBASIC12.71□□□□□ -0.37
VRK1Q99986 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
VRK1Q99986 SCARNA20.5-201ENST00000516991 142 ntBASIC12.71□□□□□ -0.37
VRK1Q99986 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.71□□□□□ -0.37
VRK1Q99986 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.71□□□□□ -0.37
VRK1Q99986 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
VRK1Q99986 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VRK1Q99986 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VRK1Q99986 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.71□□□□□ -0.37
VRK1Q99986 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.71□□□□□ -0.38
VRK1Q99986 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
VRK1Q99986 AC011840.2-201ENST00000563063 1520 ntBASIC12.71□□□□□ -0.38
VRK1Q99986 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VRK1Q99986 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
VRK1Q99986 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VRK1Q99986 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VRK1Q99986 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms