Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDLIM5Q96HC4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 PFN1P12-201ENST00000455938 534 ntBASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 RN7SL455P-201ENST00000580629 282 ntBASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDLIM5Q96HC4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AC020658.7-201ENST00000624274 2442 ntBASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 MIR1908-201ENST00000410394 80 ntBASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 BX679664.3-201ENST00000414070 555 ntBASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms