Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AC073869.1-201ENST00000415574 2762 ntBASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AC009093.2-202ENST00000620513 2079 ntBASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 TPM3P8-201ENST00000330554 643 ntBASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 RN7SKP175-201ENST00000408472 289 ntBASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 TDH-203ENST00000531764 1110 ntBASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DNAAF1Q8NEP3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 DGCR5-201ENST00000399539 862 ntBASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 AL391280.1-201ENST00000506969 1062 ntBASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
DNAAF1Q8NEP3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms