Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CCDC168Q8NDH2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.77□□□□□ -0.52
CCDC168Q8NDH2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 KRT18P33-201ENST00000398525 1043 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 PHBP10-201ENST00000416467 784 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC007881.1-201ENST00000437460 187 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 HNRNPA1P56-201ENST00000505767 954 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 CCNL2P1-201ENST00000512846 969 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC106785.2-201ENST00000564385 1319 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC087481.3-201ENST00000602886 1894 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 RHOC-205ENST00000369636 786 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC100858.1-201ENST00000514059 1228 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CCDC168Q8NDH2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 FAM86FP-201ENST00000338711 969 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 FTH1P18-201ENST00000412071 549 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 TPT1P9-201ENST00000413759 514 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 CRIP1P2-201ENST00000425396 228 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 ABCC6P2-201ENST00000526069 590 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AL049840.2-201ENST00000602722 535 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 LILRP2-202ENST00000413572 1383 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 MROH4P-201ENST00000431302 1578 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms