Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS8Q8N3P4 AL365181.1-201ENST00000564032 1828 ntBASIC21.78■■□□□ 1.08
VPS8Q8N3P4 AC108024.1-201ENST00000626286 1721 ntBASIC21.78■■□□□ 1.08
VPS8Q8N3P4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 ABCD1P2-201ENST00000429313 1601 ntBASIC21.78■■□□□ 1.08
VPS8Q8N3P4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 ABCD1P4-201ENST00000399687 604 ntBASIC21.78■■□□□ 1.08
VPS8Q8N3P4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 AC005077.3-201ENST00000449614 213 ntBASIC21.78■■□□□ 1.08
VPS8Q8N3P4 AC079250.1-201ENST00000456046 531 ntBASIC21.78■■□□□ 1.08
VPS8Q8N3P4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS8Q8N3P4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 AC013553.1-201ENST00000560906 267 ntBASIC21.77■■□□□ 1.08
VPS8Q8N3P4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
VPS8Q8N3P4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
VPS8Q8N3P4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
VPS8Q8N3P4 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC21.77■■□□□ 1.07
VPS8Q8N3P4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 FUCA1P1-201ENST00000374476 1351 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 KRT18P37-201ENST00000520711 1282 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 MIR8071-1-201ENST00000616769 65 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 MIR8071-2-201ENST00000616772 65 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 AC092115.1-201ENST00000566277 1402 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 AL359845.1-201ENST00000458202 1648 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS8Q8N3P4 BEND3P1-201ENST00000421591 1944 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 AC020763.3-201ENST00000625095 2904 ntBASIC21.76■■□□□ 1.07
VPS8Q8N3P4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 OR7E115P-201ENST00000382617 1024 ntBASIC21.75■■□□□ 1.07
VPS8Q8N3P4 STK16-203ENST00000409516 895 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms