Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 SHC1P1-201ENST00000425230 1745 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CCT8L1P-201ENST00000465400 1674 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 C2orf27AP3-201ENST00000434123 579 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 COX5BP1-201ENST00000507622 393 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AL354718.3-201ENST00000616414 581 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AC139530.3-201ENST00000620344 690 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AJ011932.1-201ENST00000621707 465 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CR382287.1-201ENST00000623954 586 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AC026271.4-201ENST00000578214 1833 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 AC025183.3-201ENST00000623526 1482 ntBASIC15.51■□□□□ 0.07
CNGA4Q8IV77 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.51■□□□□ 0.07
CNGA4Q8IV77 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 AL008718.2-201ENST00000609206 1313 ntBASIC15.5■□□□□ 0.07
CNGA4Q8IV77 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 Z98257.2-202ENST00000641138 1548 ntBASIC15.5■□□□□ 0.07
CNGA4Q8IV77 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 MIR326-201ENST00000362220 95 ntBASIC15.5■□□□□ 0.07
CNGA4Q8IV77 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 TSPY16P-201ENST00000449843 468 ntBASIC15.5■□□□□ 0.07
CNGA4Q8IV77 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 AL136301.1-201ENST00000615830 422 ntBASIC15.5■□□□□ 0.07
CNGA4Q8IV77 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 AC073862.5-201ENST00000624129 2027 ntBASIC15.5■□□□□ 0.07
CNGA4Q8IV77 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CNGA4Q8IV77 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 AL354989.2-201ENST00000435838 1540 ntBASIC15.49■□□□□ 0.07
CNGA4Q8IV77 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNGA4Q8IV77 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms