Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD4Q5XG99 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD4Q5XG99 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD4Q5XG99 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD4Q5XG99 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD4Q5XG99 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD4Q5XG99 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD4Q5XG99 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 SERBP1P2-201ENST00000436888 1164 ntBASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 AC092896.1-201ENST00000465850 380 ntBASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 AC023906.1-201ENST00000486386 453 ntBASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 AC018846.1-201ENST00000568231 183 ntBASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD4Q5XG99 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 SIRPB3P-201ENST00000340424 1216 ntBASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms