Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 CTBP2P5-201ENST00000454986 1264 ntBASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 Z82170.1-201ENST00000625081 3192 ntBASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 AL031719.1-201ENST00000623365 2587 ntBASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 OS9-203ENST00000389142 2457 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDKAL1Q5VV42 PCDHB18P-202ENST00000526308 3197 ntBASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 AL358781.1-202ENST00000321081 1360 ntBASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 ANKRD19P-201ENST00000338192 862 ntBASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 KLF2P4-201ENST00000451959 1225 ntBASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 EEF1DP1-201ENST00000585891 896 ntBASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 AL161773.1-201ENST00000624845 863 ntBASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 SBF1P1-201ENST00000444527 5631 ntBASIC15.52■□□□□ 0.08
CDKAL1Q5VV42 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 MANEA-AS1-201ENST00000564541 2268 ntBASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDKAL1Q5VV42 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 BOLA2P3-201ENST00000404566 256 ntBASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.51■□□□□ 0.07
CDKAL1Q5VV42 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms