Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 AC092865.2-201ENST00000439409 971 ntBASIC12.98□□□□□ -0.33
CACNA1BQ00975 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 AL359219.1-201ENST00000556311 934 ntBASIC12.98□□□□□ -0.33
CACNA1BQ00975 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 MIR4689-201ENST00000582517 70 ntBASIC12.98□□□□□ -0.33
CACNA1BQ00975 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 AL356740.1-201ENST00000602192 1297 ntBASIC12.98□□□□□ -0.33
CACNA1BQ00975 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC12.98□□□□□ -0.33
CACNA1BQ00975 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CACNA1BQ00975 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 RN7SL47P-201ENST00000488710 299 ntBASIC12.97□□□□□ -0.33
CACNA1BQ00975 RNA5SP420-201ENST00000516997 137 ntBASIC12.97□□□□□ -0.33
CACNA1BQ00975 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AC010202.1-201ENST00000551181 405 ntBASIC12.97□□□□□ -0.33
CACNA1BQ00975 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AC010491.1-201ENST00000563101 2797 ntBASIC12.97□□□□□ -0.33
CACNA1BQ00975 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CACNA1BQ00975 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CACNA1BQ00975 AC026271.1-201ENST00000447794 1348 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms