Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 RN7SL455P-201ENST00000580629 282 ntBASIC14.3□□□□□ -0.12
AP1S1P61966 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.3□□□□□ -0.12
AP1S1P61966 AL133467.4-201ENST00000602953 725 ntBASIC14.3□□□□□ -0.12
AP1S1P61966 AL021707.6-201ENST00000609212 491 ntBASIC14.3□□□□□ -0.12
AP1S1P61966 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 AC061965.1-201ENST00000560524 1465 ntBASIC14.3□□□□□ -0.12
AP1S1P61966 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
AP1S1P61966 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S1P61966 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S1P61966 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 AC068760.1-201ENST00000493579 1953 ntBASIC14.29□□□□□ -0.12
AP1S1P61966 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 AC011474.4-201ENST00000623523 2076 ntBASIC14.29□□□□□ -0.12
AP1S1P61966 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
AP1S1P61966 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S1P61966 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S1P61966 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S1P61966 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.29□□□□□ -0.12
AP1S1P61966 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S1P61966 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S1P61966 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 AL359881.3-201ENST00000602640 1721 ntBASIC14.29□□□□□ -0.12
AP1S1P61966 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S1P61966 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S1P61966 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S1P61966 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.28□□□□□ -0.12
AP1S1P61966 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 LINC02486-201ENST00000604157 3000 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.28□□□□□ -0.12
AP1S1P61966 AL807761.2-201ENST00000422849 729 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 PPP1R2P4-201ENST00000424051 595 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.28□□□□□ -0.12
AP1S1P61966 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S1P61966 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 CEP164P1-201ENST00000455142 418 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S1P61966 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S1P61966 SLC25A15P3-201ENST00000505530 290 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AP1S1P61966 AC134698.3-201ENST00000523880 214 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S1P61966 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S1P61966 CAP2P1-201ENST00000557743 1390 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 KRT18P8-201ENST00000581937 1246 ntBASIC14.28□□□□□ -0.12
AP1S1P61966 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S1P61966 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S1P61966 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
AP1S1P61966 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S1P61966 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms