Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.8□□□□□ -0.36
VBP1P61758 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.8□□□□□ -0.36
VBP1P61758 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 AL031432.4-201ENST00000641729 2190 ntBASIC12.8□□□□□ -0.36
VBP1P61758 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.79□□□□□ -0.36
VBP1P61758 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.79□□□□□ -0.36
VBP1P61758 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 AC073335.2-201ENST00000610177 3441 ntBASIC12.79□□□□□ -0.36
VBP1P61758 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 MRPL3P1-201ENST00000400109 1033 ntBASIC12.79□□□□□ -0.36
VBP1P61758 RNA5SP416-201ENST00000516838 111 ntBASIC12.79□□□□□ -0.36
VBP1P61758 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.79□□□□□ -0.36
VBP1P61758 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.79□□□□□ -0.36
VBP1P61758 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.79□□□□□ -0.36
VBP1P61758 SLC25A6P4-201ENST00000586535 553 ntBASIC12.79□□□□□ -0.36
VBP1P61758 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.79□□□□□ -0.36
VBP1P61758 LINC02084-201ENST00000606069 1096 ntBASIC12.79□□□□□ -0.36
VBP1P61758 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.79□□□□□ -0.36
VBP1P61758 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VBP1P61758 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VBP1P61758 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VBP1P61758 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VBP1P61758 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VBP1P61758 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VBP1P61758 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
VBP1P61758 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
VBP1P61758 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 AL805961.2-201ENST00000642139 4817 ntBASIC12.78□□□□□ -0.36
VBP1P61758 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.78□□□□□ -0.36
VBP1P61758 SPDYE14P-201ENST00000442619 822 ntBASIC12.78□□□□□ -0.36
VBP1P61758 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms