Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNA3P52797 AL591122.2-201ENST00000624125 1853 ntBASIC13.31□□□□□ -0.28
EFNA3P52797 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNA3P52797 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNA3P52797 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.3□□□□□ -0.28
EFNA3P52797 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA3P52797 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA3P52797 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
EFNA3P52797 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
EFNA3P52797 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA3P52797 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.3□□□□□ -0.28
EFNA3P52797 MAGEA5-201ENST00000446757 942 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.3□□□□□ -0.28
EFNA3P52797 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA3P52797 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
EFNA3P52797 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.3□□□□□ -0.28
EFNA3P52797 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 MIR3147-201ENST00000577811 66 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 RN7SL455P-201ENST00000580629 282 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.3□□□□□ -0.28
EFNA3P52797 RPL17P45-201ENST00000586289 509 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 AC005632.3-201ENST00000605544 308 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 AC007881.3-201ENST00000608897 607 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 AL021707.6-201ENST00000609212 491 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 AC242376.2-201ENST00000619355 883 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
EFNA3P52797 SHMT1P1-201ENST00000419974 1312 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA3P52797 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNA3P52797 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 SNX18-202ENST00000343017 3140 ntBASIC13.3□□□□□ -0.28
EFNA3P52797 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.3□□□□□ -0.28
EFNA3P52797 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
EFNA3P52797 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA3P52797 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA3P52797 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA3P52797 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA3P52797 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
EFNA3P52797 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.29□□□□□ -0.28
EFNA3P52797 AC092506.1-202ENST00000401022 528 ntBASIC13.29□□□□□ -0.28
EFNA3P52797 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA3P52797 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA3P52797 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA3P52797 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.29□□□□□ -0.28
EFNA3P52797 NDUFB10P1-201ENST00000567319 521 ntBASIC13.29□□□□□ -0.28
EFNA3P52797 MIR4722-201ENST00000578292 60 ntBASIC13.29□□□□□ -0.28
EFNA3P52797 AC103810.10-201ENST00000606504 343 ntBASIC13.29□□□□□ -0.28
EFNA3P52797 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.29□□□□□ -0.28
EFNA3P52797 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
EFNA3P52797 ST20-AS1-201ENST00000560255 4223 ntBASIC13.29□□□□□ -0.28
EFNA3P52797 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
EFNA3P52797 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms