Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GALNT15-201ENST00000339732 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 RASGRP4-217ENST00000615439 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 KRT8P47-201ENST00000604727 1398 ntBASIC9.14□□□□□ -0.95
PCP4P48539 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC9.14□□□□□ -0.95
PCP4P48539 ZNF2-203ENST00000614034 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 FRY-202ENST00000380250 10688 ntTSL 5 BASIC9.14□□□□□ -0.95
PCP4P48539 FRY-209ENST00000642040 10697 ntBASIC9.14□□□□□ -0.95
PCP4P48539 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC9.14□□□□□ -0.95
PCP4P48539 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC9.14□□□□□ -0.95
PCP4P48539 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC9.14□□□□□ -0.95
PCP4P48539 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 NME4-211ENST00000620944 1193 ntTSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 TRIM26-268ENST00000454678 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 IMPDH1P8-201ENST00000413639 1525 ntBASIC9.14□□□□□ -0.95
PCP4P48539 AC133919.3-201ENST00000621407 1804 ntBASIC9.14□□□□□ -0.95
PCP4P48539 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC9.14□□□□□ -0.95
PCP4P48539 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PCP4P48539 AC011337.1-201ENST00000606930 3317 ntBASIC9.14□□□□□ -0.95
PCP4P48539 GAD1-202ENST00000358196 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 IFIH1-201ENST00000263642 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PCP4P48539 FAM131B-201ENST00000409222 3823 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 BRINP1-201ENST00000265922 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 TM2D1-202ENST00000371177 3218 ntTSL 5 BASIC9.14□□□□□ -0.95
PCP4P48539 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
PCP4P48539 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PCP4P48539 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
PCP4P48539 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 AP001527.1-201ENST00000566440 1957 ntBASIC9.13□□□□□ -0.95
PCP4P48539 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 NIPAL1-201ENST00000295461 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 BTK-202ENST00000372880 2248 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC9.13□□□□□ -0.95
PCP4P48539 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 TTC31-201ENST00000233623 3235 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 TTC30B-201ENST00000408939 4017 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
PCP4P48539 NAGA-203ENST00000403363 1856 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 U82695.1-201ENST00000635752 1889 ntBASIC9.13□□□□□ -0.95
PCP4P48539 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 GALNT11-208ENST00000434507 2747 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 CPEB1-216ENST00000618449 2459 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 AC016831.5-201ENST00000605249 1998 ntBASIC9.13□□□□□ -0.95
PCP4P48539 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 KRT80-202ENST00000394815 3859 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 VIT-204ENST00000401530 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 PCDHGB6-201ENST00000520790 4599 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PCP4P48539 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 PHC1P1-201ENST00000554937 3061 ntBASIC9.13□□□□□ -0.95
PCP4P48539 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC9.13□□□□□ -0.95
PCP4P48539 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PCP4P48539 TMEM169-205ENST00000454545 3460 ntAPPRIS P1 TSL 4 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms