RNA–Protein interactions for RNA: ENST00000295461.9

NIPAL1-201, Transcript of NIPA like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL1, Length 5,300 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-201ENST00000295461 NISCHQ9Y2I1 1504 aa21.83■■□□□ 1.09
NIPAL1-201ENST00000295461 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
NIPAL1-201ENST00000295461 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
NIPAL1-201ENST00000295461 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.79
NIPAL1-201ENST00000295461 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
NIPAL1-201ENST00000295461 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
NIPAL1-201ENST00000295461 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
NIPAL1-201ENST00000295461 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
NIPAL1-201ENST00000295461 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
NIPAL1-201ENST00000295461 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
NIPAL1-201ENST00000295461 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.52
NIPAL1-201ENST00000295461 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
NIPAL1-201ENST00000295461 HRCP23327 699 aa18.19■□□□□ 0.5
NIPAL1-201ENST00000295461 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
NIPAL1-201ENST00000295461 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
NIPAL1-201ENST00000295461 ABCC9O60706 1549 aa18.04■□□□□ 0.48
NIPAL1-201ENST00000295461 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
NIPAL1-201ENST00000295461 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
NIPAL1-201ENST00000295461 APLP2Q06481 763 aa17.96■□□□□ 0.47
NIPAL1-201ENST00000295461 ZEB1P37275 1124 aaPredicted RBP17.95■□□□□ 0.46
NIPAL1-201ENST00000295461 UBTFP17480 764 aaKnown RBP17.95■□□□□ 0.46
NIPAL1-201ENST00000295461 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
NIPAL1-201ENST00000295461 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
NIPAL1-201ENST00000295461 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
NIPAL1-201ENST00000295461 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
NIPAL1-201ENST00000295461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
NIPAL1-201ENST00000295461 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
NIPAL1-201ENST00000295461 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
NIPAL1-201ENST00000295461 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
NIPAL1-201ENST00000295461 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
NIPAL1-201ENST00000295461 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
NIPAL1-201ENST00000295461 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
NIPAL1-201ENST00000295461 ITGAEP38570 1179 aa17.33■□□□□ 0.36
NIPAL1-201ENST00000295461 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
NIPAL1-201ENST00000295461 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
NIPAL1-201ENST00000295461 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
NIPAL1-201ENST00000295461 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
NIPAL1-201ENST00000295461 NACADO15069 1562 aa17.15■□□□□ 0.34
NIPAL1-201ENST00000295461 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
NIPAL1-201ENST00000295461 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
NIPAL1-201ENST00000295461 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
NIPAL1-201ENST00000295461 FAM50AQ14320 339 aaKnown RBP16.94■□□□□ 0.3
NIPAL1-201ENST00000295461 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
NIPAL1-201ENST00000295461 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
NIPAL1-201ENST00000295461 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
NIPAL1-201ENST00000295461 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
NIPAL1-201ENST00000295461 WIZO95785 1651 aa16.87■□□□□ 0.29
NIPAL1-201ENST00000295461 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
NIPAL1-201ENST00000295461 ACIN1Q9UKV3 1341 aaKnown RBP16.84■□□□□ 0.29
NIPAL1-201ENST00000295461 SOGA1O94964 1423 aa16.83■□□□□ 0.28
NIPAL1-201ENST00000295461 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
NIPAL1-201ENST00000295461 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
NIPAL1-201ENST00000295461 CLIP1P30622 1438 aa16.8■□□□□ 0.28
NIPAL1-201ENST00000295461 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
NIPAL1-201ENST00000295461 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
NIPAL1-201ENST00000295461 NEFLP07196 543 aa16.77■□□□□ 0.27
NIPAL1-201ENST00000295461 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
NIPAL1-201ENST00000295461 EEA1Q15075 1411 aa16.74■□□□□ 0.27
NIPAL1-201ENST00000295461 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
NIPAL1-201ENST00000295461 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
NIPAL1-201ENST00000295461 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
NIPAL1-201ENST00000295461 POLR3GLQ9BT43 218 aa16.66■□□□□ 0.26
NIPAL1-201ENST00000295461 ARID3CA6NKF2 412 aa16.64■□□□□ 0.25
NIPAL1-201ENST00000295461 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
NIPAL1-201ENST00000295461 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
NIPAL1-201ENST00000295461 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
NIPAL1-201ENST00000295461 MIER1Q8N108 512 aa16.59■□□□□ 0.25
NIPAL1-201ENST00000295461 BCANQ96GW7 911 aa16.55■□□□□ 0.24
NIPAL1-201ENST00000295461 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
NIPAL1-201ENST00000295461 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
NIPAL1-201ENST00000295461 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.23
NIPAL1-201ENST00000295461 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
NIPAL1-201ENST00000295461 ANP32CO43423 234 aa16.45■□□□□ 0.22
NIPAL1-201ENST00000295461 FBLN2P98095 1184 aa16.45■□□□□ 0.22
NIPAL1-201ENST00000295461 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
NIPAL1-201ENST00000295461 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
NIPAL1-201ENST00000295461 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
NIPAL1-201ENST00000295461 HIRIP3Q9BW71 556 aaPredicted RBP16.4■□□□□ 0.22
NIPAL1-201ENST00000295461 ZNF326Q5BKZ1 582 aaKnown RBP16.39■□□□□ 0.21
NIPAL1-201ENST00000295461 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
NIPAL1-201ENST00000295461 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
NIPAL1-201ENST00000295461 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
NIPAL1-201ENST00000295461 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
NIPAL1-201ENST00000295461 TONSLQ96HA7 1378 aa16.33■□□□□ 0.21
NIPAL1-201ENST00000295461 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
NIPAL1-201ENST00000295461 MYT1Q01538 1121 aa16.32■□□□□ 0.2
NIPAL1-201ENST00000295461 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
NIPAL1-201ENST00000295461 CUX2O14529 1486 aa16.31■□□□□ 0.2
NIPAL1-201ENST00000295461 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
NIPAL1-201ENST00000295461 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
NIPAL1-201ENST00000295461 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
NIPAL1-201ENST00000295461 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
NIPAL1-201ENST00000295461 RRP7BPQ9NSQ0 103 aa16.24■□□□□ 0.19
NIPAL1-201ENST00000295461 FKBP8Q14318 412 aa16.23■□□□□ 0.19
NIPAL1-201ENST00000295461 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
NIPAL1-201ENST00000295461 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
NIPAL1-201ENST00000295461 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
NIPAL1-201ENST00000295461 SYNJ1O43426 1573 aa16.11■□□□□ 0.17
NIPAL1-201ENST00000295461 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
NIPAL1-201ENST00000295461 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms