Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CEACAM3P40198 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.71□□□□□ -0.54
CEACAM3P40198 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CEACAM3P40198 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.71□□□□□ -0.54
CEACAM3P40198 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.71□□□□□ -0.54
CEACAM3P40198 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CEACAM3P40198 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CEACAM3P40198 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CEACAM3P40198 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CEACAM3P40198 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.7□□□□□ -0.54
CEACAM3P40198 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 KRT18P36-201ENST00000411618 1276 ntBASIC11.7□□□□□ -0.54
CEACAM3P40198 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 AC044849.1-201ENST00000519737 1188 ntBASIC11.7□□□□□ -0.54
CEACAM3P40198 EMC4-209ENST00000559421 497 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 SNORD3B-2-202ENST00000571722 791 ntBASIC11.7□□□□□ -0.54
CEACAM3P40198 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.7□□□□□ -0.54
CEACAM3P40198 MIR6799-201ENST00000620297 69 ntBASIC11.7□□□□□ -0.54
CEACAM3P40198 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 HSPA8P5-201ENST00000456928 2069 ntBASIC11.7□□□□□ -0.54
CEACAM3P40198 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CEACAM3P40198 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CEACAM3P40198 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.7□□□□□ -0.54
CEACAM3P40198 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 AL590824.1-201ENST00000403828 1349 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms