Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC18.72■□□□□ 0.59
USP6P35125 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC18.72■□□□□ 0.59
USP6P35125 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC18.72■□□□□ 0.59
USP6P35125 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC18.72■□□□□ 0.59
USP6P35125 HNRNPA1P16-201ENST00000575692 955 ntBASIC18.72■□□□□ 0.59
USP6P35125 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.72■□□□□ 0.59
USP6P35125 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC18.72■□□□□ 0.59
USP6P35125 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC18.72■□□□□ 0.59
USP6P35125 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC18.71■□□□□ 0.59
USP6P35125 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 AC103702.1-201ENST00000548801 2630 ntBASIC18.71■□□□□ 0.59
USP6P35125 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
USP6P35125 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 AL157823.1-201ENST00000403727 628 ntBASIC18.71■□□□□ 0.59
USP6P35125 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
USP6P35125 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 OR7E155P-201ENST00000412208 1014 ntBASIC18.71■□□□□ 0.59
USP6P35125 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.71■□□□□ 0.59
USP6P35125 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC18.71■□□□□ 0.59
USP6P35125 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
USP6P35125 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC18.71■□□□□ 0.59
USP6P35125 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.71■□□□□ 0.59
USP6P35125 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP6P35125 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC18.71■□□□□ 0.59
USP6P35125 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
USP6P35125 RN7SL605P-201ENST00000577229 281 ntBASIC18.71■□□□□ 0.59
USP6P35125 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.71■□□□□ 0.59
USP6P35125 RN7SL134P-201ENST00000579756 303 ntBASIC18.71■□□□□ 0.59
USP6P35125 FAM226B-201ENST00000602508 1490 ntBASIC18.71■□□□□ 0.59
USP6P35125 LINC02486-201ENST00000604157 3000 ntBASIC18.71■□□□□ 0.59
USP6P35125 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC18.71■□□□□ 0.59
USP6P35125 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.71■□□□□ 0.59
USP6P35125 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC18.71■□□□□ 0.59
USP6P35125 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
USP6P35125 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
USP6P35125 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC18.7■□□□□ 0.58
USP6P35125 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 AC008536.3-201ENST00000623282 1599 ntBASIC18.7■□□□□ 0.58
USP6P35125 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC18.7■□□□□ 0.58
USP6P35125 RPL18AP16-201ENST00000424057 531 ntBASIC18.7■□□□□ 0.58
USP6P35125 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC18.7■□□□□ 0.58
USP6P35125 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
USP6P35125 AC104212.2-201ENST00000478813 628 ntBASIC18.7■□□□□ 0.58
USP6P35125 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC18.7■□□□□ 0.58
USP6P35125 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC18.7■□□□□ 0.58
USP6P35125 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC18.7■□□□□ 0.58
USP6P35125 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
USP6P35125 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP6P35125 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms