Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VARSP26640 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.16□□□□□ -0.14
VARSP26640 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 MIR326-201ENST00000362220 95 ntBASIC14.16□□□□□ -0.14
VARSP26640 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.16□□□□□ -0.14
VARSP26640 AC104306.2-201ENST00000451877 341 ntBASIC14.16□□□□□ -0.14
VARSP26640 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
VARSP26640 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.16□□□□□ -0.14
VARSP26640 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.16□□□□□ -0.14
VARSP26640 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.16□□□□□ -0.14
VARSP26640 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC14.16□□□□□ -0.14
VARSP26640 AC027601.3-201ENST00000622907 509 ntBASIC14.16□□□□□ -0.14
VARSP26640 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VARSP26640 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.16□□□□□ -0.14
VARSP26640 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
VARSP26640 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.16□□□□□ -0.14
VARSP26640 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
VARSP26640 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 AL662890.1-201ENST00000396818 632 ntBASIC14.15□□□□□ -0.14
VARSP26640 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.15□□□□□ -0.14
VARSP26640 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.15□□□□□ -0.14
VARSP26640 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 MIR4741-201ENST00000579822 90 ntBASIC14.15□□□□□ -0.14
VARSP26640 AC020914.3-201ENST00000594712 304 ntBASIC14.15□□□□□ -0.14
VARSP26640 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 AL008638.5-201ENST00000623814 1298 ntBASIC14.15□□□□□ -0.14
VARSP26640 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VARSP26640 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 E2F3P2-201ENST00000447755 1422 ntBASIC14.15□□□□□ -0.14
VARSP26640 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.15□□□□□ -0.14
VARSP26640 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.15□□□□□ -0.14
VARSP26640 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms