Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.71□□□□□ -0.22
PTX3P26022 AGAP10P-201ENST00000454844 2418 ntBASIC13.71□□□□□ -0.22
PTX3P26022 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTX3P26022 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTX3P26022 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.71□□□□□ -0.22
PTX3P26022 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PTX3P26022 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.71□□□□□ -0.22
PTX3P26022 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.71□□□□□ -0.22
PTX3P26022 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PTX3P26022 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PTX3P26022 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 AC105206.1-202ENST00000314927 2368 ntBASIC13.7□□□□□ -0.22
PTX3P26022 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.7□□□□□ -0.22
PTX3P26022 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PTX3P26022 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PTX3P26022 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.7□□□□□ -0.22
PTX3P26022 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 AC104073.2-201ENST00000453737 312 ntBASIC13.7□□□□□ -0.22
PTX3P26022 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.7□□□□□ -0.22
PTX3P26022 AC106794.1-201ENST00000506935 792 ntBASIC13.7□□□□□ -0.22
PTX3P26022 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.7□□□□□ -0.22
PTX3P26022 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.7□□□□□ -0.22
PTX3P26022 KRT18P8-201ENST00000581937 1246 ntBASIC13.7□□□□□ -0.22
PTX3P26022 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.7□□□□□ -0.22
PTX3P26022 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 AC090164.2-201ENST00000611487 516 ntBASIC13.7□□□□□ -0.22
PTX3P26022 AC091271.1-201ENST00000611877 1162 ntBASIC13.7□□□□□ -0.22
PTX3P26022 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.7□□□□□ -0.22
PTX3P26022 LINC02486-201ENST00000604157 3000 ntBASIC13.7□□□□□ -0.22
PTX3P26022 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.7□□□□□ -0.22
PTX3P26022 AP002353.1-201ENST00000528257 1599 ntBASIC13.7□□□□□ -0.22
PTX3P26022 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PTX3P26022 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PTX3P26022 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.69□□□□□ -0.22
PTX3P26022 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
PTX3P26022 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PTX3P26022 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PTX3P26022 DPM3-202ENST00000368399 517 ntBASIC13.69□□□□□ -0.22
PTX3P26022 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.69□□□□□ -0.22
PTX3P26022 AC078875.1-201ENST00000431907 724 ntBASIC13.69□□□□□ -0.22
PTX3P26022 AC092580.1-201ENST00000433998 658 ntBASIC13.69□□□□□ -0.22
PTX3P26022 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.69□□□□□ -0.22
PTX3P26022 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.69□□□□□ -0.22
PTX3P26022 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.69□□□□□ -0.22
PTX3P26022 SNORD3B-2-202ENST00000571722 791 ntBASIC13.69□□□□□ -0.22
PTX3P26022 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.69□□□□□ -0.22
PTX3P26022 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms