Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.36□□□□□ -0.27
NR4A1P22736 AL591163.1-201ENST00000641757 987 ntBASIC13.36□□□□□ -0.27
NR4A1P22736 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A1P22736 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A1P22736 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 AC135782.3-201ENST00000562782 2105 ntBASIC13.36□□□□□ -0.27
NR4A1P22736 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A1P22736 AL137783.1-201ENST00000623494 1896 ntBASIC13.36□□□□□ -0.27
NR4A1P22736 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 PCDHB19P-202ENST00000625133 2914 ntBASIC13.35□□□□□ -0.27
NR4A1P22736 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 AC007389.4-201ENST00000454674 793 ntBASIC13.35□□□□□ -0.27
NR4A1P22736 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.35□□□□□ -0.27
NR4A1P22736 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.35□□□□□ -0.27
NR4A1P22736 SAMD11P1-201ENST00000571429 661 ntBASIC13.35□□□□□ -0.27
NR4A1P22736 AC107373.2-201ENST00000607735 490 ntBASIC13.35□□□□□ -0.27
NR4A1P22736 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NR4A1P22736 IGHV3-72-202ENST00000621503 303 ntBASIC13.35□□□□□ -0.27
NR4A1P22736 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NR4A1P22736 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A1P22736 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NR4A1P22736 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.34□□□□□ -0.27
NR4A1P22736 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NR4A1P22736 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.34□□□□□ -0.27
NR4A1P22736 BX324167.2-201ENST00000623717 3316 ntBASIC13.34□□□□□ -0.27
NR4A1P22736 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.34□□□□□ -0.27
NR4A1P22736 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.34□□□□□ -0.27
NR4A1P22736 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.34□□□□□ -0.27
NR4A1P22736 GIMAP3P-201ENST00000495150 836 ntBASIC13.34□□□□□ -0.27
NR4A1P22736 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.34□□□□□ -0.27
NR4A1P22736 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NR4A1P22736 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.34□□□□□ -0.27
NR4A1P22736 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.34□□□□□ -0.27
NR4A1P22736 AC010319.3-201ENST00000597028 470 ntBASIC13.34□□□□□ -0.27
NR4A1P22736 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.34□□□□□ -0.27
NR4A1P22736 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A1P22736 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NR4A1P22736 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms