Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TPST2P1-201ENST00000564073 1102 ntBASIC15.25■□□□□ 0.03
SYN1P17600 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYN1P17600 EMP3-204ENST00000596315 761 ntTSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 AL049840.2-201ENST00000602722 535 ntBASIC15.25■□□□□ 0.03
SYN1P17600 AC087072.1-201ENST00000603727 421 ntBASIC15.25■□□□□ 0.03
SYN1P17600 AC112220.4-201ENST00000604982 1263 ntBASIC15.25■□□□□ 0.03
SYN1P17600 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 AC148476.1-201ENST00000622182 705 ntBASIC15.25■□□□□ 0.03
SYN1P17600 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYN1P17600 AC105917.1-201ENST00000506637 2539 ntBASIC15.25■□□□□ 0.03
SYN1P17600 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYN1P17600 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYN1P17600 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 ACE3P-201ENST00000423435 1973 ntBASIC15.25■□□□□ 0.03
SYN1P17600 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYN1P17600 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SYN1P17600 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SYN1P17600 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SYN1P17600 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.25■□□□□ 0.03
SYN1P17600 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC15.24■□□□□ 0.03
SYN1P17600 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 RPL4P6-201ENST00000438116 1304 ntBASIC15.24■□□□□ 0.03
SYN1P17600 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.24■□□□□ 0.03
SYN1P17600 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SYN1P17600 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 RNA5SP491-201ENST00000362936 118 ntBASIC15.24■□□□□ 0.03
SYN1P17600 U3.5-201ENST00000363448 216 ntBASIC15.24■□□□□ 0.03
SYN1P17600 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SYN1P17600 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.24■□□□□ 0.03
SYN1P17600 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC15.24■□□□□ 0.03
SYN1P17600 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC15.24■□□□□ 0.03
SYN1P17600 SORD2P-201ENST00000558556 1069 ntBASIC15.24■□□□□ 0.03
SYN1P17600 RN7SL300P-201ENST00000582522 318 ntBASIC15.24■□□□□ 0.03
SYN1P17600 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.24■□□□□ 0.03
SYN1P17600 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SYN1P17600 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.24■□□□□ 0.03
SYN1P17600 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SYN1P17600 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.24■□□□□ 0.03
SYN1P17600 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SYN1P17600 PPT1-215ENST00000641471 2368 ntBASIC15.23■□□□□ 0.03
SYN1P17600 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SYN1P17600 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SYN1P17600 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 YY1P2-201ENST00000438766 948 ntBASIC15.23■□□□□ 0.03
SYN1P17600 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.23■□□□□ 0.03
SYN1P17600 MARK2P17-201ENST00000498560 841 ntBASIC15.23■□□□□ 0.03
SYN1P17600 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC15.23■□□□□ 0.03
SYN1P17600 AC023051.2-201ENST00000541141 460 ntBASIC15.23■□□□□ 0.03
SYN1P17600 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.23■□□□□ 0.03
SYN1P17600 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.23■□□□□ 0.03
SYN1P17600 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms