Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
PEPDP12955 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 Z82170.1-201ENST00000625081 3192 ntBASIC13.29□□□□□ -0.28
PEPDP12955 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.29□□□□□ -0.28
PEPDP12955 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PEPDP12955 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
PEPDP12955 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PEPDP12955 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.28□□□□□ -0.28
PEPDP12955 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 HSPA8P5-201ENST00000456928 2069 ntBASIC13.28□□□□□ -0.28
PEPDP12955 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PEPDP12955 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.28□□□□□ -0.28
PEPDP12955 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PEPDP12955 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 KHSRPP1-201ENST00000427983 1768 ntBASIC13.28□□□□□ -0.28
PEPDP12955 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.28□□□□□ -0.28
PEPDP12955 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PEPDP12955 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PEPDP12955 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.28□□□□□ -0.28
PEPDP12955 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 MIR1247-201ENST00000408206 136 ntBASIC13.28□□□□□ -0.28
PEPDP12955 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 SERPINA13P-202ENST00000478994 924 ntBASIC13.28□□□□□ -0.28
PEPDP12955 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.28□□□□□ -0.28
PEPDP12955 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.28□□□□□ -0.28
PEPDP12955 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.28□□□□□ -0.28
PEPDP12955 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.28□□□□□ -0.28
PEPDP12955 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 AC005730.2-201ENST00000564549 1184 ntBASIC13.28□□□□□ -0.28
PEPDP12955 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 AC009884.2-201ENST00000603110 324 ntBASIC13.28□□□□□ -0.28
PEPDP12955 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.28□□□□□ -0.28
PEPDP12955 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PEPDP12955 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PEPDP12955 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.28□□□□□ -0.28
PEPDP12955 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PEPDP12955 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PEPDP12955 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PEPDP12955 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
PEPDP12955 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
PEPDP12955 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
PEPDP12955 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.27□□□□□ -0.28
PEPDP12955 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PEPDP12955 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
PEPDP12955 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PEPDP12955 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.27□□□□□ -0.29
PEPDP12955 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
PEPDP12955 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PEPDP12955 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
PEPDP12955 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
PEPDP12955 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.27□□□□□ -0.29
PEPDP12955 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms