Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 AC093462.1-201ENST00000621167 1683 ntBASIC15.44■□□□□ 0.06
TGFB1I1O43294 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TGFB1I1O43294 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TGFB1I1O43294 AC073548.1-201ENST00000624088 1882 ntBASIC15.44■□□□□ 0.06
TGFB1I1O43294 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 KRT8P31-201ENST00000504812 1408 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AC135782.3-201ENST00000562782 2105 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 MIR769-201ENST00000390225 118 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 MIR3619-201ENST00000579667 83 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 RN7SL574P-201ENST00000581512 297 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 MIR4754-201ENST00000582477 89 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 LINC01783-202ENST00000614408 828 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AP001505.2-201ENST00000616815 443 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 BX284668.2-205ENST00000619677 828 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AC025183.3-201ENST00000623526 1482 ntBASIC15.43■□□□□ 0.06
TGFB1I1O43294 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TGFB1I1O43294 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.43■□□□□ 0.06
TGFB1I1O43294 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 MIR645-201ENST00000385283 94 ntBASIC15.42■□□□□ 0.06
TGFB1I1O43294 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 AC073869.2-201ENST00000417338 1026 ntBASIC15.42■□□□□ 0.06
TGFB1I1O43294 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 AC006335.1-201ENST00000445200 547 ntBASIC15.42■□□□□ 0.06
TGFB1I1O43294 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 AC103810.3-201ENST00000583567 96 ntBASIC15.42■□□□□ 0.06
TGFB1I1O43294 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms