Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA2E9PIF3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC124068.2-201ENST00000569473 1109 ntBASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 MIR3147-201ENST00000577811 66 ntBASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 MIR5572-201ENST00000583188 137 ntBASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC103810.10-201ENST00000606504 343 ntBASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 MIR7845-201ENST00000618396 99 ntBASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 AC011498.7-201ENST00000624986 2027 ntBASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA2E9PIF3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NPIPA2E9PIF3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AP000356.3-201ENST00000382243 753 ntBASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AP000358.1-201ENST00000456260 156 ntBASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 RN7SL530P-201ENST00000485097 298 ntBASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 PHBP15-201ENST00000574228 665 ntBASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 MIR3677-201ENST00000578964 60 ntBASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AC051619.9-201ENST00000623237 597 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms