Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00473A8K010 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00473A8K010 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00473A8K010 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
LINC00473A8K010 RCC2P1-201ENST00000452257 1476 ntBASIC11.62□□□□□ -0.55
LINC00473A8K010 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC00473A8K010 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00473A8K010 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00473A8K010 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
LINC00473A8K010 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LINC00473A8K010 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00473A8K010 AL359183.1-201ENST00000623796 2132 ntBASIC11.62□□□□□ -0.55
LINC00473A8K010 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00473A8K010 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
LINC00473A8K010 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 AL359845.1-201ENST00000458202 1648 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 KRT18P36-201ENST00000411618 1276 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00473A8K010 FAM58BP-201ENST00000439056 645 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00473A8K010 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00473A8K010 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 PGAM1P5-201ENST00000548011 764 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00473A8K010 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00473A8K010 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00473A8K010 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 AC244157.2-201ENST00000616239 1006 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 AC133540.1-201ENST00000620845 1019 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 CR392039.2-201ENST00000623182 509 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.61□□□□□ -0.55
LINC00473A8K010 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 AC009474.1-201ENST00000455096 1565 ntBASIC11.61□□□□□ -0.55
LINC00473A8K010 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
LINC00473A8K010 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00473A8K010 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00473A8K010 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00473A8K010 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms