Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 HMGA1P1-201ENST00000415560 1062 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 VDAC1P1-201ENST00000439229 848 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 RNMTL1P1-201ENST00000454103 560 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 GPR53P-205ENST00000457298 1084 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 TUBB8P8-201ENST00000458717 1058 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC140658.4-201ENST00000561990 352 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC008805.1-201ENST00000590892 364 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC010328.2-201ENST00000597698 1111 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AP002353.1-201ENST00000528257 1599 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CICP20-201ENST00000443330 2801 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 MARK2P9-201ENST00000430958 1727 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 AC018629.1-201ENST00000623381 1736 ntBASIC11.49□□□□□ -0.57
SRRM4A7MD48 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SRRM4A7MD48 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SRRM4A7MD48 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SRRM4A7MD48 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SRRM4A7MD48 AC103592.1-201ENST00000394513 664 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms