Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 DMBX1-202ENST00000371956 2882 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 GUCY1A3-207ENST00000511108 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AC020917.4-201ENST00000623994 1999 ntBASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 FAM8A6P-201ENST00000407496 1135 ntBASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 RASA4DP-201ENST00000460726 1199 ntBASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 GUSBP12-201ENST00000513727 720 ntBASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 AL390719.2-201ENST00000606993 987 ntBASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 GGTLC5P-201ENST00000617623 998 ntBASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 HLA-C-210ENST00000640219 976 ntBASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 CDH4-201ENST00000543233 3117 ntTSL 2 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 TRAF3IP2-208ENST00000392556 2188 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 KIAA0040-203ENST00000545251 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
LINC01558Q9Y6Z2 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms