Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 TBC1D27-202ENST00000424239 1573 ntBASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 U73169.1-201ENST00000395152 367 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 KRT18P44-201ENST00000416086 1285 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 RPL18AP15-201ENST00000430258 517 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AC006328.1-201ENST00000437571 379 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 FAM187B2P-201ENST00000577135 713 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 RN7SL455P-201ENST00000580629 282 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AP001462.1-201ENST00000594089 452 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AC010503.4-201ENST00000615487 688 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 NF1P11-201ENST00000621292 1282 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 KRT8P43-201ENST00000406052 1458 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 RPL13AP3-202ENST00000494676 1473 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 AC015688.4-201ENST00000580780 1647 ntBASIC17■□□□□ 0.31
ZC3H4Q9UPT8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ZC3H4Q9UPT8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 U3.5-201ENST00000363448 216 ntBASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 AC000077.1-201ENST00000420012 953 ntBASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CCND3P1-201ENST00000438347 580 ntBASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 B9D1-206ENST00000461069 923 ntTSL 2 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms