Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 PDIA3P2-201ENST00000428073 158 ntBASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 AC245884.6-201ENST00000515672 1067 ntBASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 AC020922.3-201ENST00000595064 547 ntBASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 AL109837.1-201ENST00000603272 613 ntBASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 MEG3_2.1-201ENST00000611456 105 ntBASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PRTFDC1Q9NRG1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.4□□□□□ -0.27
PRTFDC1Q9NRG1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.4□□□□□ -0.27
PRTFDC1Q9NRG1 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 KRT17P5-201ENST00000332088 839 ntBASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AC008723.1-201ENST00000506922 207 ntBASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 ALG1L13P-202ENST00000519320 584 ntBASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
PRTFDC1Q9NRG1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PRTFDC1Q9NRG1 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms