Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 PIK3R1-216ENST00000523872 2473 ntTSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 RIMBP2-202ENST00000535703 3685 ntTSL 5 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 IL24-204ENST00000391929 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 CNTN2-232ENST00000640428 4146 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 ZSCAN2-204ENST00000358472 3231 ntTSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 SIGLEC10-202ENST00000353836 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 C16orf96-201ENST00000444310 3823 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 CPNE8-203ENST00000538596 2875 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 RAD51C-201ENST00000337432 2591 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 VWFP1-201ENST00000457911 2907 ntBASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PPP2R2B-205ENST00000394414 2262 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AC018521.1-202ENST00000641877 2655 ntBASIC8.45□□□□□ -1.06
SVIPQ8NHG7 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AC245505.2-201ENST00000553572 3055 ntBASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AC009065.1-201ENST00000564055 1225 ntBASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PCA3_2.1-201ENST00000612507 409 ntBASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AL121900.1-201ENST00000428285 1695 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 OPRM1-204ENST00000360422 1737 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 ITGAD-201ENST00000389202 3912 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 BOLL-202ENST00000321801 3135 ntAPPRIS P4 TSL 2 BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SVIPQ8NHG7 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SVIPQ8NHG7 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms