Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AC138894.2-201ENST00000602838 371 ntBASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AL133467.4-201ENST00000602953 725 ntBASIC15.3■□□□□ 0.04
BEST2Q8NFU1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AC067931.2-201ENST00000623655 2003 ntBASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AL591122.2-201ENST00000624125 1853 ntBASIC15.3■□□□□ 0.04
BEST2Q8NFU1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 TEKT4P2-202ENST00000559466 1312 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 AC069218.1-201ENST00000435269 762 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 FGFR3P1-201ENST00000449999 601 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 MPRIPP1-201ENST00000452433 1089 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 NDUFS6P1-201ENST00000485187 316 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 RPL18AP8-201ENST00000486071 528 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 AC005632.3-201ENST00000605544 308 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 AC073352.2-201ENST00000609385 439 ntBASIC15.29■□□□□ 0.04
BEST2Q8NFU1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
BEST2Q8NFU1 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms