Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.68□□□□□ -0.38
LINC00346Q8IVM7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AC005034.1-201ENST00000426657 489 ntBASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AC009884.2-201ENST00000603110 324 ntBASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AC244157.2-201ENST00000616239 1006 ntBASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AC073548.1-201ENST00000624088 1882 ntBASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LINC00346Q8IVM7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00346Q8IVM7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms