Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.92□□□□□ -0.02
RFWD3Q6PCD5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 AP002353.1-201ENST00000528257 1599 ntBASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 TSPY25P-201ENST00000429463 745 ntBASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 AC020922.3-201ENST00000595064 547 ntBASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 MEG3_2.1-201ENST00000611456 105 ntBASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 MIR6074-201ENST00000612054 107 ntBASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 AL122018.1-201ENST00000446607 2310 ntBASIC14.91□□□□□ -0.02
RFWD3Q6PCD5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 UPF3AP2-201ENST00000457924 1132 ntBASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 RN7SL720P-201ENST00000488178 304 ntBASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 AC105129.2-201ENST00000559536 390 ntBASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 AC064801.2-201ENST00000625052 1303 ntBASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.9□□□□□ -0.02
RFWD3Q6PCD5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms