Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.52■□□□□ 0.4
RC3H1Q5TC82 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
RC3H1Q5TC82 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
RC3H1Q5TC82 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RC3H1Q5TC82 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RC3H1Q5TC82 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RC3H1Q5TC82 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RC3H1Q5TC82 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 KRT18P44-201ENST00000416086 1285 ntBASIC17.51■□□□□ 0.39
RC3H1Q5TC82 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 RN7SL684P-201ENST00000465665 294 ntBASIC17.51■□□□□ 0.39
RC3H1Q5TC82 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 AC011431.1-201ENST00000512971 230 ntBASIC17.51■□□□□ 0.39
RC3H1Q5TC82 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RC3H1Q5TC82 AC103702.1-201ENST00000548801 2630 ntBASIC17.51■□□□□ 0.39
RC3H1Q5TC82 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 AHCYP3-201ENST00000420053 1279 ntBASIC17.5■□□□□ 0.39
RC3H1Q5TC82 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 RN7SL523P-201ENST00000484401 298 ntBASIC17.5■□□□□ 0.39
RC3H1Q5TC82 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 AC023051.2-201ENST00000541141 460 ntBASIC17.5■□□□□ 0.39
RC3H1Q5TC82 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 RN7SL480P-201ENST00000581481 294 ntBASIC17.5■□□□□ 0.39
RC3H1Q5TC82 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RC3H1Q5TC82 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms