Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 SNORA50.1-201ENST00000628590 135 ntBASIC17.04■□□□□ 0.32
RFX7Q2KHR2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 AC018463.1-201ENST00000456674 917 ntBASIC17.03■□□□□ 0.32
RFX7Q2KHR2 AC095040.1-201ENST00000513286 675 ntBASIC17.03■□□□□ 0.32
RFX7Q2KHR2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 AC138701.2-201ENST00000553634 226 ntBASIC17.03■□□□□ 0.32
RFX7Q2KHR2 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 SIGLEC22P-201ENST00000599104 714 ntBASIC17.03■□□□□ 0.32
RFX7Q2KHR2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 AL133467.4-201ENST00000602953 725 ntBASIC17.03■□□□□ 0.32
RFX7Q2KHR2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 FMO6P-201ENST00000236166 1620 ntBASIC17.03■□□□□ 0.32
RFX7Q2KHR2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX7Q2KHR2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AL391647.1-201ENST00000395664 511 ntBASIC17.02■□□□□ 0.32
RFX7Q2KHR2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 ERP29P1-201ENST00000442902 706 ntBASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AL139424.3-202ENST00000641619 917 ntBASIC17.02■□□□□ 0.32
RFX7Q2KHR2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms