Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSBP1Q04837 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSBP1Q04837 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SSBP1Q04837 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSBP1Q04837 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
SSBP1Q04837 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSBP1Q04837 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSBP1Q04837 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SSBP1Q04837 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SSBP1Q04837 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.08□□□□□ -0.47
SSBP1Q04837 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
SSBP1Q04837 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SSBP1Q04837 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.08□□□□□ -0.48
SSBP1Q04837 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 ZNF493-208ENST00000599461 1769 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 AC103592.1-201ENST00000394513 664 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.08□□□□□ -0.48
SSBP1Q04837 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.08□□□□□ -0.48
SSBP1Q04837 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.08□□□□□ -0.48
SSBP1Q04837 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 AC097493.3-201ENST00000509725 367 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.08□□□□□ -0.48
SSBP1Q04837 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.08□□□□□ -0.48
SSBP1Q04837 ENPP7P5-201ENST00000541031 1031 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SSBP1Q04837 MIR3687-2-201ENST00000577708 61 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 AC099568.2-201ENST00000609194 695 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 MIR3687-1-201ENST00000614492 61 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.08□□□□□ -0.48
SSBP1Q04837 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.08□□□□□ -0.48
SSBP1Q04837 ENPP7P14-201ENST00000621765 1040 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 Z92544.3-201ENST00000624747 417 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 MIR193BHG-211ENST00000641433 5365 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 MARK2P16-201ENST00000605714 1723 ntBASIC12.08□□□□□ -0.48
SSBP1Q04837 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
SSBP1Q04837 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SSBP1Q04837 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SSBP1Q04837 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SSBP1Q04837 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
SSBP1Q04837 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.07□□□□□ -0.48
SSBP1Q04837 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
SSBP1Q04837 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.07□□□□□ -0.48
SSBP1Q04837 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.07□□□□□ -0.48
SSBP1Q04837 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.07□□□□□ -0.48
SSBP1Q04837 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.07□□□□□ -0.48
SSBP1Q04837 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.07□□□□□ -0.48
SSBP1Q04837 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SSBP1Q04837 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms