Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACTBP60709 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 AL928654.5-201ENST00000624831 2501 ntBASIC12.35□□□□□ -0.43
ACTBP60709 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.35□□□□□ -0.43
ACTBP60709 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ACTBP60709 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.34□□□□□ -0.43
ACTBP60709 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 RNU1-114P-201ENST00000365297 166 ntBASIC12.34□□□□□ -0.43
ACTBP60709 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 MIR661-201ENST00000384842 89 ntBASIC12.34□□□□□ -0.43
ACTBP60709 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.34□□□□□ -0.43
ACTBP60709 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.34□□□□□ -0.43
ACTBP60709 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.34□□□□□ -0.43
ACTBP60709 AC123567.1-201ENST00000548294 1261 ntBASIC12.34□□□□□ -0.43
ACTBP60709 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.34□□□□□ -0.43
ACTBP60709 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.34□□□□□ -0.43
ACTBP60709 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.34□□□□□ -0.43
ACTBP60709 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
ACTBP60709 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ACTBP60709 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.34□□□□□ -0.43
ACTBP60709 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACTBP60709 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ACTBP60709 INTS4P2-202ENST00000614726 2019 ntBASIC12.33□□□□□ -0.43
ACTBP60709 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.33□□□□□ -0.43
ACTBP60709 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ACTBP60709 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ACTBP60709 TNRC18P1-201ENST00000502875 3650 ntBASIC12.33□□□□□ -0.44
ACTBP60709 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
ACTBP60709 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.33□□□□□ -0.44
ACTBP60709 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 AC125807.2-201ENST00000513358 3514 ntBASIC12.33□□□□□ -0.44
ACTBP60709 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.33□□□□□ -0.44
ACTBP60709 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.33□□□□□ -0.44
ACTBP60709 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
ACTBP60709 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACTBP60709 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.33□□□□□ -0.44
ACTBP60709 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.33□□□□□ -0.44
ACTBP60709 AC134915.1-201ENST00000426461 574 ntBASIC12.33□□□□□ -0.44
ACTBP60709 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms