Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 PCDHA5-203ENST00000614258 4248 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A2P43354 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A2P43354 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 AL133267.1-201ENST00000398220 340 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 AC099336.1-201ENST00000417053 1171 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 FAM21FP-201ENST00000426241 1131 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 FO681548.1-201ENST00000455617 1132 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 AC007551.1-201ENST00000457394 519 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 AL583810.1-201ENST00000553344 1045 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
NR4A2P43354 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.09□□□□□ -0.31
NR4A2P43354 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.09□□□□□ -0.31
NR4A2P43354 MIR4525-201ENST00000580000 75 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.09□□□□□ -0.31
NR4A2P43354 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A2P43354 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A2P43354 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 AC012531.1-201ENST00000562848 2680 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 AC020910.6-201ENST00000623084 1459 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 AC134312.5-201ENST00000568031 1313 ntBASIC13.09□□□□□ -0.31
NR4A2P43354 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
NR4A2P43354 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A2P43354 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NR4A2P43354 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A2P43354 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A2P43354 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NR4A2P43354 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.08□□□□□ -0.31
NR4A2P43354 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NR4A2P43354 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NR4A2P43354 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.08□□□□□ -0.31
NR4A2P43354 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.08□□□□□ -0.31
NR4A2P43354 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NR4A2P43354 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NR4A2P43354 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.08□□□□□ -0.31
NR4A2P43354 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
NR4A2P43354 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 AOC4P-203ENST00000566825 2289 ntBASIC13.08□□□□□ -0.32
NR4A2P43354 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NR4A2P43354 AC092933.1-201ENST00000393644 945 ntBASIC13.08□□□□□ -0.32
NR4A2P43354 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NR4A2P43354 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NR4A2P43354 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 ACTBP11-201ENST00000436287 1126 ntBASIC13.08□□□□□ -0.32
NR4A2P43354 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.08□□□□□ -0.32
NR4A2P43354 AC012441.1-201ENST00000446669 685 ntBASIC13.08□□□□□ -0.32
NR4A2P43354 CSF2RBP1-201ENST00000447905 391 ntBASIC13.08□□□□□ -0.32
NR4A2P43354 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NR4A2P43354 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 244.8 ms