Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
MDH1P40925 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MDH1P40925 DNM1P41-201ENST00000623634 3350 ntBASIC14.33□□□□□ -0.11
MDH1P40925 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
MDH1P40925 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 RCC2P1-201ENST00000452257 1476 ntBASIC14.33□□□□□ -0.12
MDH1P40925 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 AL139400.1-201ENST00000366220 510 ntBASIC14.33□□□□□ -0.12
MDH1P40925 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 AC004835.2-201ENST00000603762 682 ntBASIC14.33□□□□□ -0.12
MDH1P40925 AL138828.2-201ENST00000615812 383 ntBASIC14.33□□□□□ -0.12
MDH1P40925 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MDH1P40925 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 PES1-205ENST00000405677 2708 ntTSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
MDH1P40925 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.33□□□□□ -0.12
MDH1P40925 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MDH1P40925 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.32□□□□□ -0.12
MDH1P40925 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC14.32□□□□□ -0.12
MDH1P40925 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MDH1P40925 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
MDH1P40925 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
MDH1P40925 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.32□□□□□ -0.12
MDH1P40925 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MDH1P40925 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.32□□□□□ -0.12
MDH1P40925 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
MDH1P40925 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MDH1P40925 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MDH1P40925 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.32□□□□□ -0.12
MDH1P40925 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MDH1P40925 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MDH1P40925 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC14.32□□□□□ -0.12
MDH1P40925 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MDH1P40925 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MDH1P40925 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MDH1P40925 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MDH1P40925 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MDH1P40925 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MDH1P40925 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MDH1P40925 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MDH1P40925 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.31□□□□□ -0.12
MDH1P40925 ELL2P1-201ENST00000413990 1906 ntBASIC14.31□□□□□ -0.12
MDH1P40925 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.31□□□□□ -0.12
MDH1P40925 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MDH1P40925 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MDH1P40925 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MDH1P40925 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MDH1P40925 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms