Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 AC009093.2-202ENST00000620513 2079 ntBASIC15.1■□□□□ 0.01
CHRNA3P32297 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 AC135782.3-201ENST00000562782 2105 ntBASIC15.1■□□□□ 0.01
CHRNA3P32297 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CHRNA3P32297 AC131212.3-201ENST00000624087 4219 ntBASIC15.09■□□□□ 0.01
CHRNA3P32297 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.09■□□□□ 0.01
CHRNA3P32297 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRNA3P32297 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.09■□□□□ 0.01
CHRNA3P32297 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.09■□□□□ 0.01
CHRNA3P32297 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.09■□□□□ 0.01
CHRNA3P32297 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.09■□□□□ 0.01
CHRNA3P32297 AL358472.3-201ENST00000608147 415 ntBASIC15.09■□□□□ 0.01
CHRNA3P32297 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.09■□□□□ 0.01
CHRNA3P32297 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CHRNA3P32297 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRNA3P32297 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRNA3P32297 DMBT1P1-203ENST00000636837 4628 ntBASIC15.09■□□□□ 0.01
CHRNA3P32297 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHRNA3P32297 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
CHRNA3P32297 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHRNA3P32297 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CHRNA3P32297 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CHRNA3P32297 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CHRNA3P32297 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.08■□□□□ 0.01
CHRNA3P32297 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CHRNA3P32297 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.08■□□□□ 0
CHRNA3P32297 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRNA3P32297 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CHRNA3P32297 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRNA3P32297 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRNA3P32297 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.08■□□□□ 0
CHRNA3P32297 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.08■□□□□ 0
CHRNA3P32297 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRNA3P32297 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CHRNA3P32297 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CHRNA3P32297 MIR1247-201ENST00000408206 136 ntBASIC15.08■□□□□ 0
CHRNA3P32297 POM121L10P-201ENST00000436994 1285 ntBASIC15.08■□□□□ 0
CHRNA3P32297 AC099548.2-209ENST00000480264 625 ntBASIC15.08■□□□□ 0
CHRNA3P32297 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.08■□□□□ 0
CHRNA3P32297 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.08■□□□□ 0
CHRNA3P32297 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.08■□□□□ 0
CHRNA3P32297 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.08■□□□□ 0
CHRNA3P32297 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CHRNA3P32297 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.08■□□□□ 0
CHRNA3P32297 AC244093.1-201ENST00000610837 814 ntBASIC15.08■□□□□ 0
CHRNA3P32297 AL136301.1-201ENST00000615830 422 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms