Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 HLA-DMA-203ENST00000395305 777 ntBASIC16.55■□□□□ 0.24
ERCC3P19447 AC073869.2-201ENST00000417338 1026 ntBASIC16.55■□□□□ 0.24
ERCC3P19447 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC3P19447 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.55■□□□□ 0.24
ERCC3P19447 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 AC027237.1-201ENST00000560942 655 ntBASIC16.55■□□□□ 0.24
ERCC3P19447 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.55■□□□□ 0.24
ERCC3P19447 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 NUDT4P2-201ENST00000578341 546 ntBASIC16.55■□□□□ 0.24
ERCC3P19447 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC3P19447 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 AL591471.1-201ENST00000621855 229 ntBASIC16.55■□□□□ 0.24
ERCC3P19447 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC3P19447 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC3P19447 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC3P19447 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ERCC3P19447 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERCC3P19447 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
ERCC3P19447 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERCC3P19447 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ERCC3P19447 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ERCC3P19447 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ERCC3P19447 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 LYPLA2P1-203ENST00000447689 696 ntBASIC16.54■□□□□ 0.24
ERCC3P19447 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.54■□□□□ 0.24
ERCC3P19447 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.54■□□□□ 0.24
ERCC3P19447 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.54■□□□□ 0.24
ERCC3P19447 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.54■□□□□ 0.24
ERCC3P19447 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC3P19447 AC105137.3-201ENST00000617588 984 ntBASIC16.54■□□□□ 0.24
ERCC3P19447 AL132780.4-201ENST00000624870 1135 ntBASIC16.54■□□□□ 0.24
ERCC3P19447 AC005252.3-201ENST00000623855 2258 ntBASIC16.54■□□□□ 0.24
ERCC3P19447 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.54■□□□□ 0.24
ERCC3P19447 AC005089.1-201ENST00000619486 2241 ntBASIC16.54■□□□□ 0.24
ERCC3P19447 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC3P19447 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERCC3P19447 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC3P19447 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
ERCC3P19447 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC3P19447 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 AC113367.3-201ENST00000508316 1912 ntBASIC16.53■□□□□ 0.24
ERCC3P19447 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 AC097065.1-201ENST00000425737 517 ntBASIC16.53■□□□□ 0.24
ERCC3P19447 AL354861.1-201ENST00000445213 355 ntBASIC16.53■□□□□ 0.24
ERCC3P19447 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.53■□□□□ 0.24
ERCC3P19447 AP000911.2-201ENST00000534330 502 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms