Protein–RNA interactions for Protein: P15088

CPA3, Mast cell carboxypeptidase A, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3P15088 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CPA3P15088 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.17□□□□□ -0.14
CPA3P15088 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.17□□□□□ -0.14
CPA3P15088 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.17□□□□□ -0.14
CPA3P15088 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.17□□□□□ -0.14
CPA3P15088 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CPA3P15088 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CPA3P15088 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.17□□□□□ -0.14
CPA3P15088 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPA3P15088 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPA3P15088 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CPA3P15088 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CPA3P15088 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 TMBIM7P-202ENST00000641474 1516 ntBASIC14.16□□□□□ -0.14
CPA3P15088 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CPA3P15088 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CPA3P15088 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CPA3P15088 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 C2orf27AP3-201ENST00000434123 579 ntBASIC14.16□□□□□ -0.14
CPA3P15088 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.16□□□□□ -0.14
CPA3P15088 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.16□□□□□ -0.14
CPA3P15088 COX5BP1-201ENST00000507622 393 ntBASIC14.16□□□□□ -0.14
CPA3P15088 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 TP53TG3HP-202ENST00000569755 579 ntBASIC14.16□□□□□ -0.14
CPA3P15088 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.16□□□□□ -0.14
CPA3P15088 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.16□□□□□ -0.14
CPA3P15088 AC073413.1-201ENST00000603927 732 ntBASIC14.16□□□□□ -0.14
CPA3P15088 AL354718.3-201ENST00000616414 581 ntBASIC14.16□□□□□ -0.14
CPA3P15088 CR382287.1-201ENST00000623954 586 ntBASIC14.16□□□□□ -0.14
CPA3P15088 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.16□□□□□ -0.14
CPA3P15088 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CPA3P15088 MKRN5P-201ENST00000445263 1467 ntBASIC14.16□□□□□ -0.14
CPA3P15088 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 AL445250.1-201ENST00000641671 2259 ntBASIC14.16□□□□□ -0.14
CPA3P15088 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CPA3P15088 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CPA3P15088 AP002761.4-201ENST00000565433 3361 ntBASIC14.16□□□□□ -0.14
CPA3P15088 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.15□□□□□ -0.14
CPA3P15088 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.15□□□□□ -0.14
CPA3P15088 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.15□□□□□ -0.14
CPA3P15088 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.15□□□□□ -0.14
CPA3P15088 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 AL355102.3-201ENST00000554299 1678 ntBASIC14.15□□□□□ -0.14
CPA3P15088 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.15□□□□□ -0.14
CPA3P15088 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 LAP3P2-201ENST00000454686 1454 ntBASIC14.15□□□□□ -0.14
CPA3P15088 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.15□□□□□ -0.14
CPA3P15088 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CPA3P15088 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.15□□□□□ -0.14
CPA3P15088 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.15□□□□□ -0.14
CPA3P15088 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CPA3P15088 AL136309.1-201ENST00000403917 691 ntBASIC14.15□□□□□ -0.14
CPA3P15088 AC010141.1-201ENST00000411585 623 ntBASIC14.15□□□□□ -0.14
CPA3P15088 PMS2P2-201ENST00000425039 1128 ntBASIC14.15□□□□□ -0.14
CPA3P15088 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPA3P15088 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.15□□□□□ -0.14
CPA3P15088 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CPA3P15088 KRT18P15-201ENST00000458108 1291 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms