Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
RETP07949 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
RETP07949 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RETP07949 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.38□□□□□ -0.11
RETP07949 OR51A9P-201ENST00000422578 911 ntBASIC14.38□□□□□ -0.11
RETP07949 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.38□□□□□ -0.11
RETP07949 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.38□□□□□ -0.11
RETP07949 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.38□□□□□ -0.11
RETP07949 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 TPT1P11-201ENST00000458482 498 ntBASIC14.38□□□□□ -0.11
RETP07949 RPL18AP8-201ENST00000486071 528 ntBASIC14.38□□□□□ -0.11
RETP07949 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.38□□□□□ -0.11
RETP07949 OR5BD1P-201ENST00000532527 817 ntBASIC14.38□□□□□ -0.11
RETP07949 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RETP07949 AC003686.1-201ENST00000550956 1034 ntBASIC14.38□□□□□ -0.11
RETP07949 AC068867.1-201ENST00000559855 150 ntBASIC14.38□□□□□ -0.11
RETP07949 AC027139.1-201ENST00000565286 951 ntBASIC14.38□□□□□ -0.11
RETP07949 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RETP07949 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.38□□□□□ -0.11
RETP07949 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.38□□□□□ -0.11
RETP07949 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.38□□□□□ -0.11
RETP07949 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.38□□□□□ -0.11
RETP07949 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.38□□□□□ -0.11
RETP07949 AL139339.2-201ENST00000608063 657 ntBASIC14.38□□□□□ -0.11
RETP07949 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RETP07949 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RETP07949 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RETP07949 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 AL359881.3-201ENST00000602640 1721 ntBASIC14.38□□□□□ -0.11
RETP07949 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RETP07949 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 AC007326.2-201ENST00000624224 7579 ntBASIC14.38□□□□□ -0.11
RETP07949 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RETP07949 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
RETP07949 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RETP07949 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RETP07949 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RETP07949 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RETP07949 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.37□□□□□ -0.11
RETP07949 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.37□□□□□ -0.11
RETP07949 OR2R1P-201ENST00000441404 914 ntBASIC14.37□□□□□ -0.11
RETP07949 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 AC018638.5-201ENST00000450885 754 ntBASIC14.37□□□□□ -0.11
RETP07949 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.37□□□□□ -0.11
RETP07949 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.37□□□□□ -0.11
RETP07949 AC226150.1-201ENST00000544259 466 ntBASIC14.37□□□□□ -0.11
RETP07949 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.37□□□□□ -0.11
RETP07949 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.37□□□□□ -0.11
RETP07949 KRT8P1-201ENST00000557533 1207 ntBASIC14.37□□□□□ -0.11
RETP07949 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.37□□□□□ -0.11
RETP07949 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RETP07949 AC012073.1-201ENST00000606114 1108 ntBASIC14.37□□□□□ -0.11
RETP07949 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.37□□□□□ -0.11
RETP07949 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.37□□□□□ -0.11
RETP07949 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.37□□□□□ -0.11
RETP07949 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RETP07949 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RETP07949 TEKT4P2-202ENST00000559466 1312 ntBASIC14.37□□□□□ -0.11
RETP07949 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.37□□□□□ -0.11
RETP07949 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RETP07949 AC097376.2-205ENST00000610159 5334 ntBASIC14.37□□□□□ -0.11
RETP07949 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RETP07949 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.37□□□□□ -0.11
RETP07949 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RETP07949 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms