Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 AL583810.1-201ENST00000553344 1045 ntBASIC14.35□□□□□ -0.11
APOA4P06727 RBM8B-201ENST00000555532 525 ntBASIC14.35□□□□□ -0.11
APOA4P06727 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOA4P06727 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.35□□□□□ -0.11
APOA4P06727 AL162426.1-201ENST00000624141 743 ntBASIC14.35□□□□□ -0.11
APOA4P06727 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
APOA4P06727 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOA4P06727 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 TUBB1P2-201ENST00000422712 1306 ntBASIC14.35□□□□□ -0.11
APOA4P06727 TUBB1P1-201ENST00000503144 1300 ntBASIC14.35□□□□□ -0.11
APOA4P06727 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.35□□□□□ -0.11
APOA4P06727 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA4P06727 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 CICP8-201ENST00000455800 2813 ntBASIC14.34□□□□□ -0.11
APOA4P06727 AC020658.7-201ENST00000624274 2442 ntBASIC14.34□□□□□ -0.11
APOA4P06727 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 AL391647.1-201ENST00000395664 511 ntBASIC14.34□□□□□ -0.11
APOA4P06727 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 RPS2P32-201ENST00000439199 892 ntBASIC14.34□□□□□ -0.11
APOA4P06727 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.34□□□□□ -0.11
APOA4P06727 AL645933.1-201ENST00000440087 609 ntBASIC14.34□□□□□ -0.11
APOA4P06727 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 AC021723.1-201ENST00000486306 515 ntBASIC14.34□□□□□ -0.11
APOA4P06727 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 FAM86HP-204ENST00000513466 959 ntBASIC14.34□□□□□ -0.11
APOA4P06727 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 AL008721.1-201ENST00000609964 604 ntBASIC14.34□□□□□ -0.11
APOA4P06727 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
APOA4P06727 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
APOA4P06727 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 AL008718.2-201ENST00000609206 1313 ntBASIC14.34□□□□□ -0.11
APOA4P06727 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA4P06727 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA4P06727 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOA4P06727 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.33□□□□□ -0.11
APOA4P06727 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA4P06727 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.33□□□□□ -0.11
APOA4P06727 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA4P06727 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
APOA4P06727 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
APOA4P06727 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA4P06727 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
APOA4P06727 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA4P06727 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA4P06727 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA4P06727 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
APOA4P06727 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms