Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 PTPRVP-205ENST00000641549 5067 ntBASIC14.41□□□□□ -0.1
GPC4O75487 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.41□□□□□ -0.1
GPC4O75487 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.41□□□□□ -0.1
GPC4O75487 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GPC4O75487 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.4□□□□□ -0.1
GPC4O75487 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 CICP16-201ENST00000502609 2813 ntBASIC14.4□□□□□ -0.1
GPC4O75487 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
GPC4O75487 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
GPC4O75487 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 AL354877.1-201ENST00000424412 413 ntBASIC14.4□□□□□ -0.1
GPC4O75487 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.4□□□□□ -0.1
GPC4O75487 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.4□□□□□ -0.1
GPC4O75487 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.4□□□□□ -0.1
GPC4O75487 SORD2P-201ENST00000558556 1069 ntBASIC14.4□□□□□ -0.1
GPC4O75487 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.4□□□□□ -0.1
GPC4O75487 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.4□□□□□ -0.1
GPC4O75487 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.4□□□□□ -0.1
GPC4O75487 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GPC4O75487 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC4O75487 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC4O75487 RPSAP36-202ENST00000494591 1261 ntBASIC14.39□□□□□ -0.11
GPC4O75487 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.39□□□□□ -0.11
GPC4O75487 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 RN7SL560P-201ENST00000577943 264 ntBASIC14.39□□□□□ -0.11
GPC4O75487 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.39□□□□□ -0.11
GPC4O75487 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC4O75487 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC4O75487 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.39□□□□□ -0.11
GPC4O75487 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GPC4O75487 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GPC4O75487 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 AL805961.2-201ENST00000642139 4817 ntBASIC14.39□□□□□ -0.11
GPC4O75487 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GPC4O75487 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GPC4O75487 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GPC4O75487 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GPC4O75487 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.38□□□□□ -0.11
GPC4O75487 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.38□□□□□ -0.11
GPC4O75487 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms