Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CICP8-201ENST00000455800 2813 ntBASIC11.47□□□□□ -0.57
UPK2O00526 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 AL023775.1-201ENST00000454907 1746 ntBASIC11.47□□□□□ -0.57
UPK2O00526 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
UPK2O00526 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
UPK2O00526 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 AC103592.1-201ENST00000394513 664 ntBASIC11.47□□□□□ -0.57
UPK2O00526 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK2O00526 AC079178.1-201ENST00000420915 656 ntBASIC11.47□□□□□ -0.57
UPK2O00526 AC026954.1-201ENST00000429771 1293 ntBASIC11.47□□□□□ -0.57
UPK2O00526 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 KRT17P7-201ENST00000451704 1104 ntBASIC11.47□□□□□ -0.57
UPK2O00526 CROCCP4-201ENST00000457096 498 ntBASIC11.47□□□□□ -0.57
UPK2O00526 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK2O00526 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
UPK2O00526 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.47□□□□□ -0.57
UPK2O00526 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK2O00526 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK2O00526 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK2O00526 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 AC244157.2-201ENST00000616239 1006 ntBASIC11.47□□□□□ -0.57
UPK2O00526 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
UPK2O00526 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 AC008687.7-202ENST00000637404 953 ntBASIC11.47□□□□□ -0.57
UPK2O00526 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 MIR497HG-202ENST00000572453 3838 ntBASIC11.47□□□□□ -0.57
UPK2O00526 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
UPK2O00526 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
UPK2O00526 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 AC144522.1-201ENST00000625111 1658 ntBASIC11.46□□□□□ -0.57
UPK2O00526 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK2O00526 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK2O00526 RCC2P1-201ENST00000452257 1476 ntBASIC11.46□□□□□ -0.57
UPK2O00526 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK2O00526 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms