Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.81□□□□□ -0.36
COPS3Q9UNS2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.8□□□□□ -0.36
COPS3Q9UNS2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 BCRP1-201ENST00000444246 691 ntBASIC12.8□□□□□ -0.36
COPS3Q9UNS2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 AL358472.3-201ENST00000608147 415 ntBASIC12.8□□□□□ -0.36
COPS3Q9UNS2 AC027601.3-201ENST00000622907 509 ntBASIC12.8□□□□□ -0.36
COPS3Q9UNS2 AC132938.4-201ENST00000623835 848 ntBASIC12.8□□□□□ -0.36
COPS3Q9UNS2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 POM121L4P-202ENST00000427789 1891 ntBASIC12.8□□□□□ -0.36
COPS3Q9UNS2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.8□□□□□ -0.36
COPS3Q9UNS2 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COPS3Q9UNS2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms